Defined in file : brainvisa/toolboxes/constellation/types/constellation_types.py
Anatomist clusters inspect tool
Anatomist Show Connectivity Profiles of a Specific Cortical Element
Anatomist Show Connectivity Profiles of a Specific Cortical Element, Atlas pipeline variant
Anatomist view connectivity matrix
Anatomist view connectivity matrix, Atlas pipeline variant
Anatomist view reorder matrix from labeled texture
Average Silhouette Width
Clustering From Reduced Group Matrix
Clustering From Reduced Individual Matrix
Dendrogram
Import FSL Connectomes.
Individual clusters from atlas
Mean Individual Profile From Smoothed Matrix
Reduced Individual Matrix From Filtered Reduced Profile
Smoothing of the Individual Matrix.
Sparse Individual Matrices and Profiles From Tracts.
Validity Indexes
Write a different measures in csv file
Write connectivity matrix as CSV File
Aperio svs
BMP image
DICOM image
Directory
ECAT i image
ECAT v image
FDF image
FreesurferMGH
FreesurferMGZ
GIF image
GIS image
gz compressed MINC image
gz compressed NIFTI-1 image
Hamamatsu ndpi
Hamamatsu vms
Hamamatsu vmu
JPEG image
Leica scn
MINC image
NIFTI-1 image
PBM image
PGM image
PNG image
PPM image
Sakura svslide
Sparse Matrix
SPM image
TIFF image
TIFF(.tif) image
Ventana bif
VIDA image
XBM image
XPM image
Zeiss czi
{center}/group_analysis/{group_of_subjects}/connectivity_clustering/{method}/{studyname}/{gyrus}/smooth{smoothing}/<group_of_subjects>_<method>_<studyname>_<gyrus>_group_reduced_matrix_{smallerlength}to{greaterlength}mm
{center}/group_analysis/{group_of_subjects}/connectivity_clustering/{method}/{studyname}/{gyrus}/smooth{smoothing}/<group_of_subjects>_<method>_<studyname>_<gyrus>_{sid}_reduced_matrix_{smallerlength}to{greaterlength}mm
{center}/{subject}/diffusion/{acquisition}/{analysis}/{tracking_session}/connectivity_parcellation/{method}/{studyname}/{gyrus}/matrix/<subject>_<studyname>_<gyrus>_labelled_fibers_matrix_{smallerlength}to{greaterlength}mm
{center}/{subject}/diffusion/{acquisition}/{analysis}/{tracking_session}/connectivity_parcellation/{method}/{studyname}/{gyrus}/matrix/<subject>_<studyname>_<gyrus>_semilabelled_fibers_matrix_{smallerlength}to{greaterlength}mm
{center}/{subject}/diffusion/{acquisition}/{analysis}/{tracking_session}/connectivity_parcellation/{method}/{studyname}/{gyrus}/matrix/<subject>_<studyname>_<gyrus>_complete_matrix_smooth{smoothing}_{smallerlength}to{greaterlength}mm
{center}/{subject}/diffusion/{acquisition}/{analysis}/{tracking_session}/connectivity_parcellation/{method}/{studyname}/{gyrus}/clustering/smooth{smoothing}/<subject>_<studyname>_<gyrus>_reduced_matrix_{smallerlength}to{greaterlength}mm
center , subject , acquisition , analysis , tracking_session , method , studyname , gyrus , smoothing , smallerlength , greaterlength , reduced , ends_labelled , group_of_subjects , sid